Current Members
Dr. Andrei Turinsky
Manager of CCM Bioinformatics
Andrei is a mathematician and computer scientist who is happy to apply his skills in medical research. His main interest is to search for patterns in genetic disease data by using various statistical and computational methods. He has many years of experience in data analysis and bioinformatics, and has managed several large-scale, multi-team research projects. His typical tasks involve developing computational software, writing research papers, collaborating with other biomedical teams, supervising students, and teaching. Andrei holds a PhD in mathematical computer science. His top pursuits outside SickKids are outdoor activities, working as a medical first responder, and watching too many indie movies.
Lauren Erdman
Machine Learning Core Project Manager
Lauren Erdman is the Project Manager for the new Machine Learning Core within the CCM and a PhD student in computer science at the University of Toronto (U of T) under the supervision of Anna Goldenberg. Previously, she completed a M.Sc. in computer science and a M.Sc. in biostatistics at U of T under the supervision of Anna Goldenberg and Lisa Strug, respectively. Her research is primarily focused on developing and applying machine learning methods for data integration and improved translational discovery in the areas of population genetics, genome biology, and complex disease. More recently, Lauren has become involved in the development of clinical decision support systems for Canadian hospitals. She is excited to see what opportunities the availability of larger data, increasingly digital medical records, and powerful predictive algorithms will open up for improving clinical care.
Fernando Silva
Manager of CCM High Performance Computing
Kimberly Burke
Project Coordinator
Kimberly joined CCM in June 2021 as a Project Coordinator. She plays an integral part within the team, by engaging in duties to ensure efficient operation of the facility that help meet the business and strategic direction of the SickKids Research Institute. Kimberly has 20+ years working in healthcare, most of which was spent supporting the business functions of various departments at University Health Network. She recently received her certification in project management and is currently enrolled in a BBA program.
Dr. Alper Celik
Senior Bioinformatician
Alper received his B.Sc. in molecular biology and economics from Brown University and his PhD in bioinformatics from University of Massachusetts Medical School. His thesis work focused on regulation and substrate selection of mRNA decay pathways and their interactions with the translation machinery. In addition to his thesis work, Alper has been involved in several projects in collaboration with Massachusetts General Hospital investigating the effects of mindfulness interventions in physician burnout by analyzing survey and smartwatch data. He joined the CCM in August of 2018 where his responsibilities include bioinformatics pipeline development, next-generation sequencing data analysis, statistical analysis and web application development. Alper's main research interest is applying machine learning methods to elucidate fundamental patterns in biological data and how these patterns relate to disease phenotypes.
Madeline Couse
Senior Bioinformatician
Madeline Couse received a B.Sc. in honours biology from the University of Waterloo, after which she moved West to complete an M.Sc. in genome science and technology from the University of British Columbia. There, she developed an interest in rare Mendelian disorders in children and gained expertise in whole genome analysis, including structural variant analysis from paired-end sequenced data. After graduating, she had the opportunity to work as a genome analyst for clinical research sequencing studies at British Columbia Children's Hospital. She joined the CCM team in March 2020 after some time working at a company specializing in personalized medicine in cancer. She is a devoted cyclist, an avid reader, an often-unsuccessful gardener, and an occasional crafter.
Dr. Prajkta Kallurkar
Bioinformatician
I did my bachelors in instrumentation & control engineering and masters in biomedical engineering from Indian Institute of Technology, Varanasi, India. I pursued my PhD in neuroscience from William & Mary, US where my dissertation focused on studying the neural control of breathing. I have been always intrigued in the integration of biological sciences and engineering. My interest in the field of bioinformatics began when I became part of two transcriptomics studies on breathing-related neurons. I am passionate about genomics, big data analytics and communicating scientific research to people from diverse background. In my spare time, I enjoy painting and baking.
Shireen Parimoo
Bioinformatician
Shireen joined the CCM team in October 2023. She completed her PhD at the University of Toronto in May 2023. Her research explored how the structural and functional properties of the human brain were altered over the course of the adult lifespan and how those contributed to age-related differences in cognitive functioning. She was also a Research Intern at GEMINI Medicine where she worked on projects related to deidentifying personal health information from medical data and examining physician-level variations in patient outcomes like hospital readmissions. Outside of work, Shireen enjoys long-distance running and biking, bouldering, hiking/camping, creative writing, and hosting trivia and board game nights.
Aarthi Mohan
Bioinformatician
Aarthi joined CCM in June 2020, and works on pipeline development for next-generation sequencing data analysis. Prior to joining CCM, she worked as a bioinformatician for five years in Singapore on analysis and pipeline development for detection of anti-microbial resistance in mycobacterium tuberculosis and studying transcriptional regulation in plasmodium falciparum. She received her M.Sc. in bioinformatics from Nanyang Technological University, Singapore in 2014 and B.Tech. in information technology from Anna University, India in 2009. Outside work, she enjoys yoga, hiking, and reading.
Arteen Torabi-Marashi
Bioinformatician
Arteen joined the CCM team in 2023. He received his B.Sc. with an honours specialization in Genetics and minor in Computer Science from the University of Western Ontario. He obtained his M.Sc. in Biology from McMaster University where his work focused on developing pipelines and integrating the analyses of differential gene expression, differential transcript usage and population genomics to investigate the genetic basis of natural variation in Drosophila melanogaster. Outside of bioinformatics, Arteen's interests are in sports (namely basketball and baseball) and video games.
Stanley Hua
Senior Data Analyst
Stanley Hua joined the CCM in June 2024 after finishing his bachelors in Computer Science at the University of Toronto. He’s passionate about the meaningful application of deep learning in biomedical data. He’s explored a variety of topics including supervised contrastive learning for kidney view labeling and domain generalization, large-scale microscopy datasets for weakly-supervised pre-training, and large language models for clinical applications. Outside of work, he enjoys playing table tennis at a local community centre.
Michael Li
Programmer/Analyst
Michael graduated from the University of Waterloo with a bachelor of computer science in honours computer science. He pursued an option in bioinformatics to join his interests in biological sciences and computing. Since graduation, Michael continued to diversify his interests in the other branches of computer science. In late 2016, he worked at the CCM as a part of the university's co-op program. Michael rejoined the CCM in February 2021 as part of the bioinformatics team. Outside of the CCM, Michael spent his time tackling his growing backlog of video games and technical books.
Lauren Liang
Programmer/Analyst
Lauren joined the CCM in November 2020. She currently works on RNA-sequencing data analysis pipeline development. Lauren obtained both her bachelor of science degree in biochemistry and master's of health sciences degree in medical genomics from the University of Toronto. She is interested in developing bioinformatics tools to facilitate biological research and genomics data processing. In her spare time, she enjoys playing badminton and various forms of media.
Pamela Xu
Programmer/Analyst
Pamela obtained her Bachelors degree in Molecular Genetics and masters degree in Medical Genomics both at University of Toronto. During her graduate studies, she developed a strong interest in bioinformatics and pipeline development for Next Generation Sequencing technologies. In her free time, she enjoys the company of her cat, baking and going for walks.
Nour Hanafi
Programmer/Analyst
Nour received her bachelor of science in molecular biology from the University of Toronto, and is currently a master's of health science candidate in medical genomics, also at the University of Toronto. During her graduate studies, she developed a strong interest in bioinformatics, particularly in the use and development of -omics pipelines, which she is pursuing as part of her capstone practicum at the CCM. In her free time, she enjoys reading, going for long walks, and watching sports.
Anjali Jain
Programmer/Analyst
Anjali Jain received her bachelor of technology degree in bioinformatics from Amity University, India. During her undergraduate studies, she also worked at a bioinformatics start-up where she was involved in software development. Her zest to explore the field of genomics led her to the Medical Genomics program at the University of Toronto, where she is currently enrolled in her final year. During her graduate studies, she volunteered as a Genome Analyst in the GENCOV research study at Mount Sinai Health System. She is passionate about precision medicine, bioinformatics and developing tools to analyze genomic data which furthered her resolve to pursue her career at CCM. In her spare time, Anjali enjoys arts and craft and dancing.
Mackenzie Frew
Programmer/Analyst
Kevin Mo
Programmer/Analyst
Andrew Maksymowsky
Senior Systems Analyst
Andrew graduated with a B.A.Sc. in electrical engineering from the University of Toronto. He got his start in high-performance computing systems while he was there building a small compute grid to run fluid dynamics simulations for the BlueSky Solar Racing Team. He is currently part of the CCM High Performance Computing Facility, responsible for managing and supporting the compute cluster. Outside of work he spends his time kayaking, building things and practicing violin.
Stan He
Data Scientist/Bioinformatician
Stan He joined the CCM team in July 2021. Previously, he worked as a machine learning engineer at luci.ai, where he helped build the route optimization platform for food delivery. Stan also has more than eight years of experience in academic research in the field of geophysics using numerical simulation and seismic tomography through programming languages such as Python and Bash under the Linux system. In his spare time, Stan likes to go hiking, play badminton, hang out with friends, and expand on his skills using various online resources.
Monika Sahai
Research Student
Sam Osia
Programmer/Analyst
Alumni
| Name | Former Job Title |
| Rob Naccarato | Senior Manager |
| Dr. Arun Ramani | Scientific Director |
| Dr. Michael Brudno | Scientific Director |
| Dr. Jonathan Dursi | Senior Research Associate |
| Veronika Koltunova | Senior Programmer & Analyst |
| Amanjeev Sethi | Senior Software Analyst |
| Daniel Snider | Computer Vision Engineer |
| Mike Gindin | Software Developer |
| Dorin Manase | Bioinformatician |
| Viswateja Nelakuditi | Bioinformatician |
| Dennis Kao | Programmer & Analyst |
| Krista Pace | Operations Lead |
| Dr. Parisa Shooshtari | Research Associate |
| Dr. Sergey Naumenko | Research Associate |
| Brittney Johnstone | Research Genetic Counsellor |
| Justin Foong | Senior Bioinformatician |
| Dr. Marta Girdea | Software Development Manager |
| Amanda Silva | Project Manager |
| Sian Brooks | Administrative Coordinator |
| Pouria Mashouri | Systems Administrator |
| Stephen Villagonzalo | Senior Systems Analyst |
| Sergiu Dumitriu | Senior Bioinformatician |
| Andrei Misyura | Senior Programmer & Analyst |
| Sasha Andjic | Project Coordinator |
| Julian Mazzitelli | Software Developer |
| Shaikh Rashid | Senior Programmer & Analyst |
| Martin Pham | Software Developer |
| Dr. Yue Jiang | Research Associate |
| Ian Stedman | Research Fellow |
| Hillary Elrick | Bioinformatician |
| Dr. Sam Khalouei | Bioinformatician |
| Michael Apostolides | Programmer & Analyst |
| Hajany Jeyakumar | Project Coordinator |
| Dr. Naveed Qureshi | Senior Data Analyst |
| Mia Husic | Clinical Research Project Assistant |
| Jyoti Adlakha Gupta | Project Coordinator & Scrum Master |
| Samuel Kimuli | Systems Administrator |
| Conor Klamann | Programmer & Analyst |
| Grace Xu | Software Developer — Co-op Student |
| Orion Buske | Graduate Student |
| Aryan Arbabi | Graduate Student |
| Nicole Sultanum | Graduate Student |
| Anusha Dey | Research Student |
| Kat Pavlova | Research Student |
| Micaela Consens | Research Student |
| Kevin Lu | Programmer & Analyst |
| Delvin So | Bioinformatician |
| Jenny Xu | Systems Administrator |
| Anna Guo | Systems Administrator |
| Meredith Gillespie | Genetic Counsellor |
| Dong Hu | Senior Systems Analyst |
| Sebastian Burlacu | Systems Analyst |
| Jixuan Wang | Graduate Student – PhD Candidate |
| Marta Skreta | Graduate Student – PhD Candidate |
| Steven Ufkes | Bioinformatician |
| Shania Wu | Research Student |
| Ilham Abbasi | Research Student |
| Vikas Kaushik | Research Student |
| Rishan Varatheeswaran | Research Student |
| Suzan Ahmad | Research Student |